Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838439.1_cds_XP_016506990.1_20160
CDS Infomation

[gene=LOC107824703] [db_xref=GeneID:107824703] [protein=GTPase HflX-like] [protein_id=XP_016506990.1] [location=join(5040..5411,6134..6276,6669..6785,7042..7156,7233..7370,8256..8351,8435..8548,8750..8818,8950..9020,9100..9193,9734..9862,9986..10075,12394..12486)] [gbkey=CDS]
Sequence

ATGAGTTTATGCTTCTGCTCCAATTTGAAACCATCCATTCTATTTCCGGACTCCGATTTG
CGATGGAATCCAACCCGTACCCGACCCGTTTCATTCACTAAGCTAAGGCAAACCAATTAC
AGTTTCATTAAGGCCGTCGGAGAAGAAATCGGAGTGCTATCGCCGGACGACAGCTTTTCG
CTGCGTAATCCCGTAATTGAAGAGGAAACACCACCGGAGACTGAGGTTCATGAAGTAGAA
AATGAAGTTGCTGCTAGTGTTGTGGATGAAGATAAAGCTCAAAGTTGGATTAAAAAGAGT
GAGAACAAGGACCAACAAGTGGATGAGCTAGATGAAAATTCTAGTAGATTCAAGTTACTT
AACGGAAAAGAGGTTTTTGAAGAGAAAGCCTACCTAGTGGGTGTTTCATGCAGAGGTGAT
ACAGAAGATTCATTTGGTATAGAGGAATCACTCAAGGAATTGGCCCAGCTGGCTGATACT
GCTGGACTACTGGTTGTTGATTCTACATATCAGAAGCTATCTTCTCCTAATCCGAGGACT
TACATAGGGTCCGGAAAGGTTGCAGAGATCAAAACTGCTATTCGTGCATTTGATGTTGAG
ACCGTGATATTTGATGATGAACTTTCTCCAGGACAATTGCGTAATCTGGAAAAGGCTTTT
GGTGGGGATGTCAGAGTGTGTGATCGCACTGCTCTCATCCTGGATATTTTCAACCAGCGA
GCGGCAACCCGTGAAGCGTCTTTACAGGTATCATTGGCACAAATGGAATACCAATTACCA
CGGCTAACCCGTATGTGGACTCATCTTGAGCGTCAAGCTGGAGGACAGGTCAAGGGTATG
GGTGAAAAACAAATTGAAGTAGACAAGAGAATTTTACGTACTCAGATTGGTGTACTCAAG
AAAGAGTTAGAATCTGTTCGGAAGCATCGCAAACAGTATAGGAACCGTCGTGTCTCTGTA
CCTGTCCCTGTTGTATCTTTGGTTGGATACACAAATGCTGGCAAAAGTACACTTCTTAAC
CGGTTGACTGGGGCCGATGTTCTTGCAGAAGACCGATTATTCGCAACACTTGATCCTACT
ACCAGAAGGGTGCAGATGAAGAATGGGAAGGAATTTCTGCTTACAGATACTGTTGGCTTC
ATCCAAAAATTACCAACCACTCTGGTTGCAGCCTTTAGGGCAACACTCGAAGAAATCGCA
GAGTCTTCAATTTTAGTGCATGTGGTGGACATCAGTCATCCACTAGCGGAGCTACAGATA
GAAGCTGTGGAGAAAGTTCTCTCAGAACTGGATGCAGTATCAATTCCGAAGTTGATGGTG
TGGAACAAGGTTGATAAAGCTAGGGACCCTGAGAAAATCAAGTTGGAAGCCAAGACAAAA
AACGATGTGGTCTGCGTTTCTGCTTTAACTGGTGAAGGTTTGGATGAATTCTGCAACGAA
ATCCAGAATAGACTAAAGGATACAATGGTATGGGTGGAAGCTTTGATTCCATTCGATAAA
GGGGAACTCCTCAGTACCATACATCATGTTGGAATGGTTGAGAGAACTGAATACACTGAG
AAAGGAACTCTGGTTAGAGCACATGTTCCCCTCCGATTTGCAAGGCTTCTAACTCCAATG
AGGCAAATGTGTGTATCATAA

Peptide Sequence

PEP ID

XP_016506990.1
PEP Infomation

PREDICTED: GTPase HflX-like [Nicotiana tabacum]
Sequence

MSLCFCSNLKPSILFPDSDLRWNPTRTRPVSFTKLRQTNYSFIKAVGEEIGVLSPDDSFS
LRNPVIEEETPPETEVHEVENEVAASVVDEDKAQSWIKKSENKDQQVDELDENSSRFKLL
NGKEVFEEKAYLVGVSCRGDTEDSFGIEESLKELAQLADTAGLLVVDSTYQKLSSPNPRT
YIGSGKVAEIKTAIRAFDVETVIFDDELSPGQLRNLEKAFGGDVRVCDRTALILDIFNQR
AATREASLQVSLAQMEYQLPRLTRMWTHLERQAGGQVKGMGEKQIEVDKRILRTQIGVLK
KELESVRKHRKQYRNRRVSVPVPVVSLVGYTNAGKSTLLNRLTGADVLAEDRLFATLDPT
TRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEIAESSILVHVVDISHPLAELQI
EAVEKVLSELDAVSIPKLMVWNKVDKARDPEKIKLEAKTKNDVVCVSALTGEGLDEFCNE
IQNRLKDTMVWVEALIPFDKGELLSTIHHVGMVERTEYTEKGTLVRAHVPLRFARLLTPM
RQMCVS

Transcript Sequence

Gene sequence data has not been registered.